2.10. Loading OrthoMCL results¶
2.10.1. Load OrthoMCL¶
python manage.py load_orthomcl --file groups.txt
- Loading this file can be faster if you increase the number of threads (–cpu).
python manage.py load_orthomcl --help
–file | Output result from OrthoMCL software.* |
–cpu | Number of threads |
* required fields.
2.10.2. Remove orthology¶
If, by any reason, you need to remove orthology relationships, you should use the command remove_feature_annotation.
python manage.py remove_feature_annotation --help
–cvterm TERM | ‘orthologous group’* |
–organism ORGANISM | Species name. (eg. Homo sapiens, Mus musculus) |
* required fields